From HFML-FELIX Wiki
FTICR software
[edit source]- Spike project
- A python based software package for FTICR processing hosted at GitHub
- Useful review of data analysis by Peter O' Connor (Warwick) is 10.1002/mas.21414
Cygwin fixes
[edit source]- Scipy does not compile using default setting for pip as it does not find openblas
pip install scipy -Csetup-args=-Dblas=blas -Csetup-args=-Dlapack=lapack
- Found at stackoverflow.com
- Upgrading all packages installed via pip
pip3 list -o | cut -f1 -d' ' | tr " " "\n" | awk '{if(NR>=3)print}' | cut -d' ' -f1 | xargs -n1 pip3 install -U
Virtual environment Python
[edit source]- Initialize a virtual environment
/cygdrive/c/Users/jmbakker/AppData/Local/Programs/Python/Python312/python -m venv .
- Install requirements
./Scripts/pip install <package>
- Run your local script
./Scripts/python <script.py>
- or add a shebang
#!/usr/bin/env -S\_/bin/sh\_-c\_"exec\_\$(dirname\_"\$0")/scripts/python\_-E\_"\$0"\_"\$@""
Some often needed supplies
[edit source]- Gas purifier scrubbers FTICR
- agilent.com/store/en_US/Prod-CP17973/CP17973
